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Near-data processing in database systems on native computational storage under HTAP workloads
(2022)
Today’s Hybrid Transactional and Analytical Processing (HTAP) systems, tackle the ever-growing data in combination with a mixture of transactional and analytical workloads. While optimizing for aspects such as data freshness and performance isolation, they build on the traditional data-to-code principle and may trigger massive cold data transfers that impair the overall performance and scalability. Firstly, in this paper we show that Near-Data Processing (NDP) naturally fits in the HTAP design space. Secondly, we propose an NDP database architecture, allowing transactionally consistent in-situ executions of analytical operations in HTAP settings. We evaluate the proposed architecture in state-of-the-art key/value-stores and multi-versioned DBMS. In contrast to traditional setups, our approach yields robust, resource- and cost-effcient performance.
Rapidly growing data volumes push today's analytical systems close to the feasible processing limit. Massive parallelism is one possible solution to reduce the computational time of analytical algorithms. However, data transfer becomes a significant bottleneck since it blocks system resources moving data-to-code. Technological advances allow to economically place compute units close to storage and perform data processing operations close to data, minimizing data transfers and increasing scalability. Hence the principle of Near Data Processing (NDP) and the shift towards code-to-data. In the present paper we claim that the development of NDP-system architectures becomes an inevitable task in the future. Analytical DBMS like HPE Vertica have multiple points of impact with major advantages which are presented within this paper.
Data analytics tasks on large datasets are computationally intensive and often demand the compute power of cluster environments. Yet, data cleansing, preparation, dataset characterization and statistics or metrics computation steps are frequent. These are mostly performed ad hoc, in an explorative manner and mandate low response times. But, such steps are I/O intensive and typically very slow due to low data locality, inadequate interfaces and abstractions along the stack. These typically result in prohibitively expensive scans of the full dataset and transformations on interface boundaries.
In this paper, we examine R as analytical tool, managing large persistent datasets in Ceph, a wide-spread cluster file-system. We propose nativeNDP – a framework for Near Data Processing that pushes down primitive R tasks and executes them in-situ, directly within the storage device of a cluster-node. Across a range of data sizes, we show that nativeNDP is more than an order of magnitude faster than other pushdown alternatives.
In the present tutorial we perform a cross-cut analysis of database storage management from the perspective of modern storage technologies. We argue that neither the design of modern DBMS, nor the architecture of modern storage technologies are aligned with each other. Moreover, the majority of the systems rely on a complex multi-layer and compatibility oriented storage stack. The result is needlessly suboptimal DBMS performance, inefficient utilization, or significant write amplification due to outdated abstractions and interfaces. In the present tutorial we focus on the concept of native storage, which is storage operated without intermediate abstraction layers over an open native storage interface and is directly controlled by the DBMS.
Modern mixed (HTAP)workloads execute fast update-transactions and long running analytical queries on the same dataset and system. In multi-version (MVCC) systems, such workloads result in many short-lived versions and long version-chains as well as in increased and frequent maintenance overhead.
Consequently, the index pressure increases significantly. Firstly, the frequent modifications cause frequent creation of new versions, yielding a surge in index maintenance overhead. Secondly and more importantly, index-scans incur extra I/O overhead to determine, which of the resulting tuple versions are visible to the executing transaction (visibility-check) as current designs only store version/timestamp information in the base table – not in the index. Such index-only visibility-check is critical for HTAP workloads on large datasets.
In this paper we propose the Multi Version Partitioned B-Tree (MV-PBT) as a version-aware index structure, supporting index-only visibility checks and flash-friendly I/O patterns. The experimental evaluation indicates a 2x improvement for analytical queries and 15% higher transactional throughput under HTAP workloads. MV-PBT offers 40% higher tx. throughput compared to WiredTiger’s LSM-Tree implementation under YCSB.
An index in a Multi-Version DBMS (MV-DBMS) has to reflect different tuple versions of a single data item. Existing approaches follow the paradigm of logically separating the tuple version data from the data item, e.g. an index is only allowed to return at most one version of a single data item (while it may return multiple data items that match a search criteria). Hence to determine the valid (and therefore visible) tuple version of a data item, the MV-DBMS first fetches all tuple versions that match the search criteria and subsequently filters visible versions using visibility checks. This involves I/O storage accesses to tuple versions that do not have to be fetched. In this vision paper we present the Multi Version Index (MV-IDX) approach that allows index-only visibility checks which significantly reduce the amount of I/O storage accesses as well as the index maintenance overhead. The MV-IDX achieves significantly lower response times and higher transactional throughput on OLTP workloads.
Characteristics of modern computing and storage technologies fundamentally differ from traditional hardware. There is a need to optimally leverage their performance, endurance and energy consumption characteristics. Therefore, existing architectures and algorithms in modern high performance database management systems have to be redesigned and advanced. Multi Version Concurrency Control (MVCC) approaches in data-base management systems maintain multiple physically independent tuple versions. Snapshot isolation approaches enable high parallelism and concurrency in workloads with almost serializable consistency level. Modern hardware technologies benefit from multi-version approaches. Indexing multi-version data on modern hardware is still an open research area. In this paper, we provide a survey of popular multi-version indexing approaches and an extended scope of high performance single-version approaches. An optimal multi-version index structure brings look-up efficiency of tuple versions, which are visible to transactions, and effort on index maintenance in balance for different workloads on modern hardware technologies.
Many future Services Oriented Architecture (SOA) systems may be pervasive SmartLife applications that provide real-time support for users in everyday tasks and situations. Development of such applications will be challenging, but in this position paper we argue that their ongoing maintenance may be even more so. Ontological modelling of the application may help to ease this burden, but maintainers need to understand a system at many levels, from a broad architectural perspective down to the internals of deployed components. Thus we will need consistent models that span the range of views, from business processes through system architecture to maintainable code. We provide an initial example of such a modelling approach and illustrate its application in a semantic browser to aid in software maintenance tasks.
Nowadays almost every major company has a monitoring system and produces log data to analyse their systems. To perform analysation on the log data and to extract experience for future decisions it is important to transform and synchronize different time series. For synchronizing multiple time series several methods are provided so that they are leading to a synchronized uniform time series. This is achieved by using discretisation and approximation methodics. Furthermore the discretisation through ticks is demonstrated, as well as the respectivly illustrated results.
We introduce IPA-IDX – an approach to handle index modifications modern storage technologies (NVM, Flash) as physical in-place appends, using simplified physiological log records. IPA-IDX provides similar performance and longevity advantages for indexes as basic IPA [5] does for tables. The selective application of IPA-IDX and basic IPA to certain regions and objects, lowers the GC overhead by over 60%, while keeping the total space overhead to 2%. The combined effect of IPA and IPA-IDX increases performance by 28%.